Dataset
CZII - CryoET Object Identification Challenge - Public Test Dataset
- Dataset ID:DS-10445
Release Date: 2025-02-25
Last Modified: 2025-02-25

Photo Caption: Central slab from a representative tomogram of the in vitro sample with selected set of annotations.
Dataset Overview
This dataset is comprised of movie stacks, tiltseries, alignments, tomograms and hand-curated ground truth annotations for the purpose of training object identification algorithms in the context of the CryoET Object Identification Challenge. The data was acquired on a Krios G4 using a Falcon 4i detector and SelctrisX energy filter. Tomograms were aligned using AreTomo3 v1.0.20, reconstructed using AreTomo3 v2.0.10 and post-processed using different methods. Each run provides denoised and ctf corrected tomograms. The labels were curated as described in the accompanying paper and include point labels for Apo-ferritin, Beta-amylase, Beta-galactosidase, cytosolic ribosomes, thyroglobulin and VLP. Public leaderboard scores on Kaggle were computed based on this dataset.
Authors
Publications
Related Databases
EMDB ID:EMD-41923
Runs
121 of 121 Runs
Run Name | Tilt Series Quality Score | Objects | ||
|---|---|---|---|---|
TS_100_3 Run ID: RN-18991 | 5 - Excellent |
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TS_101_5 Run ID: RN-19006 | 5 - Excellent |
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TS_102_2 Run ID: RN-19022 | 5 - Excellent |
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TS_103_4 Run ID: RN-19036 | 5 - Excellent |
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TS_103_5 Run ID: RN-19051 | 5 - Excellent |
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TS_105_5 Run ID: RN-19068 | 5 - Excellent |
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TS_105_7 Run ID: RN-19090 | 5 - Excellent |
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TS_106_7 Run ID: RN-19110 | 5 - Excellent |
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TS_107_1 Run ID: RN-19127 | 5 - Excellent |
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TS_109_2 Run ID: RN-19151 | 5 - Excellent |
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TS_109_3 Run ID: RN-19171 | 5 - Excellent |
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TS_109_5 Run ID: RN-19192 | 5 - Excellent |
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TS_111_2 Run ID: RN-19215 | 5 - Excellent |
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TS_112_6 Run ID: RN-19234 | 5 - Excellent |
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TS_114_4 Run ID: RN-19255 | 5 - Excellent |
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TS_115_4 Run ID: RN-19275 | 5 - Excellent |
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TS_115_7 Run ID: RN-19294 | 5 - Excellent |
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TS_11_7 Run ID: RN-19317 | 5 - Excellent |
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TS_1_2 Run ID: RN-19563 | 5 - Excellent |
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TS_12_3 Run ID: RN-19338 | 5 - Excellent |
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