Deposition

BYU - Locating Bacterial Flagellar Motors Challenge Train Annotations

Deposition ID:CZCDP-10332

Release Date: 2025-08-06

Last Modified: 2025-08-06

key visualization for BYU - Locating Bacterial Flagellar Motors Challenge Train Annotations

Photo Caption: Central slab of 4 representative tomograms with selected sets of annotations.

Deposition Overview

Resulting training annotations from the "BYU - Locating Bacterial Flagellar Motors" Kaggle competition. This training set of annotations is a collection from three organizations, the hosts, and two competitors. More information on how the annotations were made is available in the accompanying paper.

Authors

C. Braxton Owens
,
Mohammed Kaplan
,
Fabian Isensee
,
Brenden Artley
,
Andrew Darley
,
Gus L.W. Hart
,
Eben Lonsdale
,
Jackson Pond

Deposition Data

Annotations:1,559

Tomograms:0

Publications

DOI:10.1101/2025.04.23.650258

Related Databases

Not Submitted

Methods Summary

Annotations	Method Type	Method Details	Method Links
1559	Hybrid	3D UNet ensemble → Napari manual annotation	Website:MotorBench Kaggle overview

Deposited Data

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Data Contents

Tilt SeriesAvailable

FramesAvailable

CTFNA

AlignmentAvailable

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1,559 of 1,559 Annotations

Annotation Name	Object Shape Type	Method Type	Deposited In
102bacterial-type flagellum motor Annotation ID: AN-32509 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PAOI delta aer2 pJN105-aer2 Run: aba2015-02-12-9
102bacterial-type flagellum motor Annotation ID: AN-32492 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PAOI delta aer2 pJN105-aer2 Run: aba2015-02-12-8
102bacterial-type flagellum motor Annotation ID: AN-32475 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PW1305 Run: aba2015-02-23-7
102bacterial-type flagellum motor Annotation ID: AN-32456 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PW1305 Run: aba2015-02-23-6
102bacterial-type flagellum motor Annotation ID: AN-32435 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PAOI delta aer2 pJN105-aer2 Run: aba2015-02-12-5
102bacterial-type flagellum motor Annotation ID: AN-32430 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PW1305 Run: aba2015-02-23-5
102bacterial-type flagellum motor Annotation ID: AN-32409 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PAOI delta aer2 pJN105-aer2 Run: aba2015-02-12-4
102bacterial-type flagellum motor Annotation ID: AN-32404 Ground Truth	Point	Hybrid	Dataset: Pseudomonas aeruginosa PAO1 Run: aba2015-05-29-60
102bacterial-type flagellum motor Annotation ID: AN-32401 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PW1305 Run: aba2015-02-23-4
102bacterial-type flagellum motor Annotation ID: AN-32374 Ground Truth	Point	Hybrid	Dataset: Pseudomonas aeruginosa PAO1 Run: aba2015-05-29-59
102bacterial-type flagellum motor Annotation ID: AN-32343 Ground Truth	Point	Hybrid	Dataset: Pseudomonas aeruginosa PAO1 Run: aba2015-05-29-58
102bacterial-type flagellum motor Annotation ID: AN-32330 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PW1305 Run: aba2015-02-23-34
102bacterial-type flagellum motor Annotation ID: AN-32327 Ground Truth	Point	Hybrid	Dataset: Pseudomonas full length aer2 Run: aba2015-07-29-9
102bacterial-type flagellum motor Annotation ID: AN-32296 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PW1305 Run: aba2015-02-23-33
102bacterial-type flagellum motor Annotation ID: AN-32278 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PAOI delta aer2 pJN105-aer2 Run: aba2015-02-12-29
102bacterial-type flagellum motor Annotation ID: AN-32269 Ground Truth	Point	Hybrid	Dataset: Pseudomonas full length aer2 Run: aba2015-07-29-44
102bacterial-type flagellum motor Annotation ID: AN-32256 Ground Truth	Point	Hybrid	Dataset: Pseudomonas aeruginosa PAO1 Run: aba2015-05-29-55
102bacterial-type flagellum motor Annotation ID: AN-32239 Ground Truth	Point	Hybrid	Dataset: Pseudomonas full length aer2 Run: aba2015-07-29-43
102bacterial-type flagellum motor Annotation ID: AN-32214 Ground Truth	Point	Hybrid	Dataset: P. aeruginosa PAOI delta aer2 pJN105-aer2 Run: aba2015-02-12-27
102bacterial-type flagellum motor Annotation ID: AN-32211 Ground Truth	Point	Hybrid	Dataset: Vibrio delta-CheA1 Run: aba2014-03-04-7