All DatasetsDataset: CryoETSim general subset - simulated cryo-electron tomograms of cellular molecular crowding

Run

sample_113

  • Run ID:RN-36157

Release Date: 2026-06-24

Last Modified: 2026-06-24

key visualization for sample_113

Photo Caption: Central slab of tomogram 62468 with selected set of annotations.

Run Overview

Tilt Series

Tilt Quality
5 - Excellent
Tilt Range120° (-60° to 60°)
Tilt Schemedose-symmetric

Tomogram

Samplings Available6.8Å
Tomogram Processing
  • denoised,
  • filtered,
  • raw

Objects

  • 2-Enoyl thioester reductase Etr1p/Etr2p,
  • 20S proteasome,
  • 26S proteasome,
  • 5-HT3 receptor,
  • 80S ribosome with HCV-IRES...
Browse Run Contents

Tomograms

4 of 4 Tomograms

Tomogram Name
Deposition Date
Alignment ID
Voxel Spacing
Reconstruction Method
Post Processing
Software
key visualization for sample_113

62471 WBP Denoised

Tomogram ID: TM-62471
Author Submitted
  • Frosina Stojanovska,
  • ... ,
  • Julia Mahamid,
  • Anna Kreshuk,
  • Judith B. Zaugg
2026-06-24

AL-35797

6.8Å
(600, 600, 108)px
WBP
denoised
Reconstruction SoftwareIMOD
Processing SoftwareCryoSiam DenseSimSiam
key visualization for sample_113

62470 WBP Filtered

Tomogram ID: TM-62470
Author Submitted
  • Frosina Stojanovska,
  • ... ,
  • Julia Mahamid,
  • Anna Kreshuk,
  • Judith B. Zaugg
2026-06-24

AL-35797

6.8Å
(600, 600, 108)px
WBP
filtered
Reconstruction SoftwareIMOD
Processing SoftwareIMOD (CTF-corrected)
key visualization for sample_113

62469 WBP Raw

Tomogram ID: TM-62469
Author Submitted
  • Frosina Stojanovska,
  • ... ,
  • Julia Mahamid,
  • Anna Kreshuk,
  • Judith B. Zaugg
2026-06-24

AL-35797

6.8Å
(600, 600, 108)px
WBP
raw
Reconstruction SoftwareIMOD
Processing SoftwareIMOD (noisy)
key visualization for sample_113

62468 WBP Raw

Tomogram ID: TM-62468
Author Submitted
  • Frosina Stojanovska,
  • ... ,
  • Julia Mahamid,
  • Anna Kreshuk,
  • Judith B. Zaugg
2026-06-24

AL-35797

6.8Å
(600, 600, 108)px
WBP
raw
Reconstruction SoftwareIMOD
Processing SoftwareIMOD (clean)